SanDiegoRecruiter
the smart solution for San Diego jobs

Sr Staff Software Engineer, Clinical Genomics

Company: Illumina
Location: San Diego
Posted on: May 18, 2019

Job Description:

Illumina is seeking a Sr. Staff Software Engineer to join the Clinical Genomics Software Engineering team, where we are improving human health by unlocking the power of the genome. By pairing high throughput sequencing of DNA with advanced algorithms, we are enabling clinicians and pathologists around the world to provide personalized diagnoses and treatments to cancer patients.

As a software engineer, you will develop algorithms for next-generation sequencing, bioinformatics pipelines, integration with instrument control software, filtering, annotation and reporting. The ideal candidate will enjoy working in a fast-paced and dynamic environment and be intrinsically driven to both create high-quality and high-performing software and affirming its quality through simulation testing, unit and integration testing, design specifications, and collaboration with the team on verification testing and refining requirements.

Join one of biotech's most successful companies to create world-class software with the best and brightest in the industry. You will work in an environment that is collaborative, innovative and fun. As an Illumina Sr. Staff Software Engineer, you will enjoy a rich network of bioinformatics scientists, software engineers and test engineers to accelerate your work.

Responsibilities


  • Work as part of Agile scrum teams to design and implement clinical-grade bioinformatics pipelines and patient-focused sequencing portals
  • Work closely with bioinformaticians and software engineers to develop novel algorithms
  • Deliver software architecture, design specifications and implementations
  • Integrate new pipelines and products with new and existing Illumina platforms
  • Maintain rigorous quality and performance standards
  • Participate in requirement, hazard, design and code reviews
  • Develop software that solves the problem at hand with an eye toward performance, extendibility and maintainability
  • Collaborate with product owners, , test engineers, systems analysts, scientists, and stakeholders to create a robust product that suits the users' needs

    Education:

    • Bachelor of Science degree or higher in Computer Science, Bioinformatics, Computational Biology or related field

      Required Skills & Experience

      • BSc/MS: 8-12+ years of experience or PhD: 4-7+ years of experience
      • Experience in an object-oriented programming language such as C++, Python, Java or C# (C++, Python preferred)
      • Experience with scripting languages, including Python, bash, R, Perl
      • Experience programming in a Linux environment
      • Algorithm development experience
      • Expertise in software engineering best practices
      • Dedicated to creating software with the utmost quality standards
      • Excellent problem solving, troubleshooting and communication skills
      • Excellent technical writing skills in English
      • Working knowledge of Linux

        Preferred Skills & Experience

        • Advanced degree in bioinformatics or computer science
        • Experience developing software for next-generation sequencing or genomics applications
        • Have an understanding of oncology, molecular biology, bioinformatics, or related field of biology
        • Probability and statistics
        • Experience writing design specifications for medical device software
        • Experience writing multi-threaded algorithms
        • Parallel or distributed computing; big data processing
        • Experience with Docker, Git, Visual Studio, .NET Core
        • HPC or cluster computing


          Illumina believes that everyone has the ability to make an impact, and we are proud to be an equal opportunity employer committed to providing employment opportunity regardless of sex, race, creed, color, gender, religion, marital status, domestic partner status, age, national origin or ancestry, physical or mental disability, medical condition, sexual orientation, pregnancy, military or veteran status, citizenship status, and genetic information. If you have a disability or special need that requires accommodation, please contact us at applications@illumina.com. To learn more, visit: https://www.dol.gov/ofccp/regs/compliance/posters/pdf/eeopost.pdf

Keywords: Illumina, San Diego , Sr Staff Software Engineer, Clinical Genomics, IT / Software / Systems , San Diego, California

Click here to apply!

Didn't find what you're looking for? Search again!

I'm looking for
in category
within


Other IT / Software / Systems Jobs


Development Technical Support
Description: Summary: Role will be to support development teams with test case development and documentation as it relates to system functionality and feature enhancements. Responsibilities Developing and maintaining (more...)
Company: GreenBox POS
Location: San Diego
Posted on: 05/26/2019

REMOTE Senior Software Developer
Description: Minimum Required Skills C, Python, Java, Mendix, SQL Server, MySQL If you are a Senior Software Developer with experience, please read on This is a 100 remote position that requires experience with Mendix. (more...)
Company: CyberCoders
Location: San Diego
Posted on: 05/26/2019

Python Developer
Description: Job Title Software Developer-Python Location San Diego, CA Duration 8 Months Hiring Manager Detailed Notes This is a Web
Company: eTeam, Inc.
Location: San Diego
Posted on: 05/26/2019


SAP QA
Description: Job title: SAP QA SAP Hybris and SAP HANA Location: Carlsbad, CA Duration: Long
Company: Wilmer Technologies Inc
Location: Carlsbad
Posted on: 05/26/2019

Remote Product tester - earn $25-$45/hour
Description: In-Home Usage Tester Product Tester--from--home Part-timePresently we're recruiting Product Testers from home in several US cities--to expand our private network of In-Home Usage Testers IHUT to (more...)
Company: American Consumer Panels
Location: Valley Center
Posted on: 05/26/2019

Javascript Developer
Description: Growing Mission Valley based healthcare software company is looking for a motivated candidate to code solutions on our JavaScript based platform. Job Summary: Build and extend existing systems to integrate (more...)
Company: VisionTree
Location: San Diego
Posted on: 05/26/2019

Senior Full Stack Developer
Description: Work Location: Ability to work remotely from home office or in a local Ryan office - anywhere in the US. br br Duties and Responsibilities: br ul br li Develops and maintains software applications (more...)
Company: Ryan, LLC
Location: San Diego
Posted on: 05/26/2019

SSAS Developer
Description: Responsibilities Senior SSAS Developer who will be responsible for Design Development
Company: Ztek Consulting
Location: Carlsbad
Posted on: 05/26/2019

Senior Software Engineer - macOS
Description: Kandji--is a venture-backed software startup headquartered in San Diego that empowers IT administrators by automating the enforcement of complex security standards against a fleet of devices. We are building (more...)
Company: Kandji
Location: San Diego
Posted on: 05/26/2019

Senior Software Engineer - Platform
Description: Kandji is a venture-backed software startup headquartered in San Diego that empowers IT administrators by automating the enforcement of complex security standards against a fleet of devices. We are building (more...)
Company: Kandji
Location: San Diego
Posted on: 05/26/2019

Log In or Create An Account

Get the latest California jobs by following @recnetCA on Twitter!

San Diego RSS job feeds